Blasticidin-S

Blasticidin-S structural formula

CAS Number2079-00-7
Molecular FormulaC17H26N8O5
Molecular Weight422.447
InChI KeyCXNPLSGKWMLZPZ-ZNIXKSQXSA-N
LogP-2.96
Synonyms
  • Blasticidin-S
  • 1-(4-{[3-Amino-1-hydroxy-5-(N-methylcarbamimidamido)pentylidene]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2-enopyranuronosyl)-4-imino-1,4-dihydropyrimidin-2-ol
  • 2-Pyrimidinol, 1-[4-[[3-amino-5-[(aminoiminomethyl)methylamino]-1-hydroxypentylidene]amino]-2,3,4-trideoxy-beta-D-erythro-hex-2-enopyranuronosyl]-1,4-dihydro-4-imino-
  • 2079-00-7
  • Bla-S
  • TOA bla-S
  • Blastizidin
  • UNII-83U64J9U23
  • (2S,3S,6R)-3-[3-amino-5-(N-methylcarbamimidamido)pentanamido]-6-(4-amino-2-oxo-2H-pyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid
  • blasticidin S
  • 11002-92-9
  • 11028-10-7
  • 1135442-94-2
  • 12767-55-4
  • 13184-51-5
  • 7562-21-2
  • 885262-44-2

Applications:

Uv-Vis Spectrum of Blasticidin S

May 26, 2026

Access the UV-Vis Spectrum SIELC Library

If you are looking for optimized HPLC method to analyze Blasticidin-S check our HPLC Applications library

UV/Vis.: λmax: 196, 278 nm

For optimal results in HPLC analysis, it is recommended to measure absorbance at a wavelength that matches the absorption maximum of the compound(s) being analyzed. The UV spectrum shown can assist in selecting an appropriate wavelength for your analysis. Please note that certain mobile phases and buffers may block wavelengths below 230 nm, rendering absorbance measurement at these wavelengths ineffective. If detection below 230 nm is required, it is recommended to use acetonitrile and water as low UV-transparent mobile phases, with phosphoric acid and its salts, sulfuric acid, and TFA as buffers.
For some compounds, the UV-Vis Spectrum is affected by the pH of the mobile phase. The compound was dissolved in acetonitrile. This analysis was done with the mobile phase made of acetonitrile.

 

 

 

 

Application Analytes:
Blasticidin-S
SIELC Technologies usually develops more than one method for each compound. Therefore, this particular method may not be the best available method from our portfolio for your specific application. Before you decide to implement this method in your research, please send us an email to research@sielc.com so we can ensure you get optimal results for your compound/s of interest.

HPLC UV Method for Analysis of Blasticidine S on Chromni Column

May 26, 2026

HPLC Method for Blasticidin-S on Chromni by SIELC Technologies

High Performance Liquid Chromatography (HPLC) Method for Analysis of Blasticidin-S

Blasticidin S is an antibiotic with the chemical formula C17H26N8O5. It is primarily used in biology research for selecting cells of interest among cell cultures. It works through disrupting protein translation within human cells, fungi, and bacteria due to it’s resemblance to cytidine. You can find detailed UV spectra of Blasticidin-S and information about its various lambda maxima by visiting the following link.

Blasticidin-S can be retained and analyzed using the Chromni stationary phase column. The analysis utilizes an isocraticmethod with a simple mobile phase consisting of acetonitrile (MeCN). Detection is performed using UV.

ColumnChromni, 4.6 x 150 mm, 3 µm, 100 A, dual ended
Mobile PhaseMeCN/H2O – 70/30
BufferAmmonium Formate pH 3.0 – 20 mM
Flow Rate1.0 ml/min
DetectionUV 275nm
Limit of Detection*3.1 ppb
*LOD was determined for this combination of instrument, method, and analyte, and it can vary from one laboratory to another even when the same general type of analysis is being performed.
Class of Compounds
Antibiotic
Analyzing CompoundsBlasticidin-S

Application Column

Chromni

Column Diameter: 4.6 mm
Column Length: 150 mm
Particle Size: 3 µm
Pore Size: 100 A
Column options: dual ended

Add to cart
Application Analytes:
Blasticidin-S

Application Detection:
UV Detection
SIELC Technologies usually develops more than one method for each compound. Therefore, this particular method may not be the best available method from our portfolio for your specific application. Before you decide to implement this method in your research, please send us an email to research@sielc.com so we can ensure you get optimal results for your compound/s of interest.

HPLC Method for Analysis of Blasticidin S on BIST B Column

May 26, 2026

HPLC Method for Blasticidin-S on BIST B by SIELC Technologies

High Performance Liquid Chromatography (HPLC) Method for Analysis of Blasticidin-S

Blasticidin S is an antibiotic with the chemical formula C17H26N8O5. It is primarily used in biology research for selecting cells of interest among cell cultures. It works through disrupting protein translation within human cells, fungi, and bacteria due to it’s resemblance to cytidine. You can find detailed UV spectra of Blasticidin-S and information about its various lambda maxima by visiting the following link.

Blasticidin-S can be retained and analyzed using the BIST B stationary phase column. The analysis utilizes a gradient method with a simple mobile phase consisting of acetonitrile (MeCN). Detection is performed using UV.

ColumnBIST B, 4.6 x 50 mm, 5 µm, 100 A, dual ended
Mobile PhaseGradient MeCN/H2O – 80/20 – 50/50 %, 10 min
BufferSulfuric Acid – 0.2%
Flow Rate1.0 ml/min
DetectionUV 275nm
Limit of Detection*13 ppb
*LOD was determined for this combination of instrument, method, and analyte, and it can vary from one laboratory to another even when the same general type of analysis is being performed.
Class of Compounds
Antibiotic
Analyzing CompoundsBlasticidin-S

Application Column

BIST B

Column Diameter: 4.6 mm
Column Length: 50 mm
Particle Size: 5 µm
Pore Size: 100 A
Column options: dual ended

Add to cart
Application Analytes:
Blasticidin-S

Application Detection:
UV Detection
SIELC Technologies usually develops more than one method for each compound. Therefore, this particular method may not be the best available method from our portfolio for your specific application. Before you decide to implement this method in your research, please send us an email to research@sielc.com so we can ensure you get optimal results for your compound/s of interest.

Separation of Blasticidin-S on Newcrom R1 HPLC column

February 16, 2018
Separation of Blasticidin-S on Newcrom C18 HPLC column

Blasticidin-S can be analyzed by this reverse phase (RP) HPLC method with simple conditions. The mobile phase contains an acetonitrile (MeCN), water, and phosphoric acid. For Mass-Spec (MS) compatible applications the phosphoric acid needs to be replaced with formic acid. Smaller 3 µm particles columns available for fast UPLC applications. This liquid chromatography method is scalable and can be used for isolation impurities in preparative separation. It also suitable for pharmacokinetics.

Application Column

Newcrom R1

The Newcrom columns are a family of reverse-phase-based columns. Newcrom A, AH, B, and BH are all mixed-mode columns with either positive or negative ion-pairing groups attached to either short (25 Å) or long (100 Å) ligand chains. Newcrom R1 is a special reverse-phase column with low silanol activity.

Select options
Application Analytes:
Blasticidin-S
The result was obtained by a proprietary SIELC algorithm. It may deviate from the actual experimental data. The experimental data are available upon request. Contact us before ordering the column as there may be a more suitable column alternative by either e-mail: support@sielc.com or by phone: 847-229-2629.