HPLC Method for Analysis of Uracil, Thymine, Hypoxanthine, Guanine on Newcrom AH Column by SIELC Technologies

Uracil, Thymine, Hypoxanthine, and Guanine are all nitrogenous bases, each playing distinct roles in the biochemistry of nucleic acids.
Uracil, also noted as U and Ura, has C4H4N2O2 chemical formula. It is a derivative of pyrimidine that is rarely found in DNA, working more often in RNA in transcription by binding to adenine through hydrogen bonds. You can find detailed UV spectra of Uracil and information about its various lambda maxima by visiting the following link.
Thymine, also noted as T and Thy, has the chemical formula C5H6N2O2. It is a a pyrimidine nucleobase that may be produced through methylation of uracil. In DNA, it creates a double hydrogen bond to Adenine to hold together the structure of DNA. You can find detailed UV spectra of Thymine and information about its various lambda maxima by visiting the following link.
Hypoxanthine is a naturally occurring purine derivative with the chemical formula C5H4N4O. It is a reaction intermediate in the metabolism of adenosine as well as a metabolite found in Escherichia coli. It’s not directly a base in standard DNA or RNA, but it plays a significant role in the metabolism of purines. It is the base form of the nucleoside inosine, which can be found in certain tRNAs. Hypoxanthine is also an intermediate in the purine degradation pathway, leading to the production of uric acid. You can find detailed UV spectra of Hypoxanthine and information about its various lambda maxima by visiting the following link.
Guanine, also noted as G and Gua, has the chemical formula C5H5N5O. By forming three hydrogen bonds with the Cytosine, it creates a base pair. It’s name comes from the Spanish term “guano”, meaning bird or bat dropping, as that is said to have been how it was first discovered. Outside of DNA, Guanine that is harvested from fish scales, is occasionally used in cosmetics for it’s luster. You can find detailed UV spectra of Guanine and information about its various lambda maxima by visiting the following link.
These nitrogenous bases are crucial for the structure, replication, and function of nucleic acids. Understanding their properties and interactions is fundamental to molecular biology and genetics.
Uracil, Thymine, Hypoxanthine, Guanine can be retained and analyzed on a mixed-mode Newcrom AH column with a mobile phase consisting of water, Acetonitrile (MeCN), and ammonium formate. This analytical method can detect compounds with high resolution and peak symmetry using UV detection at 260 nm
Condition
| Column | Newcrom AH, 4.6 x 150 mm, 5 µm, 100 A, dual ended |
| Mobile Phase | MeCN – 1% |
| Buffer | Ammonium formate pH 3.0- 6 mM |
| Flow Rate | 1.0 ml/min |
| Peak Retention Time | 2.21, 2.38, 2.81, 7.92 min |
| Detection | 260 nm |
Description
| Class of Compounds | Nucleotides |
| Analyzing Compounds | Uracil, Thymine, Hypoxanthine, Guanine |
Application Column
Newcrom AH
Column Diameter: 4.6 mm
Column Length: 150 mm
Particle Size: 5 µm
Pore Size: 100 A
Column options: dual ended
Hypoxanthine
Thymine
Uracil



